Geometry prerequisites
- Start from a physically meaningful termination, composition, and surface orientation.
- Inspect fractional and Cartesian coordinates. A tilted cell needs vacuum measured normal to the surface, not merely the length of c.
- Check that the slab has the intended thickness and no unintended cross-boundary bonds.
- Duplicate the structure before changing the cell so the original bulk or slab remains available.
Prepare the model
- Orient the surface in the a-b plane. Verify the lattice-vector geometry instead of relying only on camera orientation.
- Set cell repetition along c to 1 (e.g. 2 × 2 × 1) to inspect the in-plane extended surface without repeating along the vacuum direction.
- Use the explicit vacuum action for the a-b surface. Inspect the updated cell and confirm interatomic Cartesian distances remain appropriate.
- Choose an in-plane mesh N × M × 1, with N and M established by convergence.
- Review the electrostatic treatment in the generated or expert QE input. Asymmetric, polar, and charged slabs need specific consideration.
- Converge slab thickness, vacuum, and in-plane sampling against the quantity of interest.
Understand a strained slab
Biaxial in-plane strain modifies the in-plane metric. Record the strain tensor, reference lattice, and whether atoms are relaxed at fixed in-plane cell.
Changing vacuum height changes the three-dimensional cell volume without changing the physical sheet thickness. A reported stress or conductivity normalized by this arbitrary volume may require a clearly defined two-dimensional conversion.
The c-vacuum helper does not construct every wire, arbitrary Miller-index slab, or isolated cluster. Import or prepare the appropriate geometry when the required operation is outside the builder tools.
Validate before submission
| Check | Evidence to retain |
|---|---|
| Surface and orientation | Cell vectors, coordinates, termination, and original source. |
| Vacuum | Normal separation and at least two tested separations around the selected value. |
| Sampling | Executed k mesh and in-plane convergence results. |
| Electrostatics | Exact QE settings and their physical justification. |
| Relaxation | Fixed and free degrees of freedom, force threshold, and final geometry. |