Skip to content
phynite-lab
Phynite DocumentationDownload

Troubleshooting: locate a failed workflow stage

Identify the first stage that did not complete. Retrying a downstream action cannot repair an earlier missing structure, disconnected worker, or incompatible numerical source.

Complete guide

Decision table

What you seeLikely stageNext check
New project is unavailableAccount workspace initializationAllow the workspace to load. On a cloud error, reload; do not clear browser data containing unsynchronized edits.
Structure will not importParsing or geometryCheck format, encoding, lattice, coordinates, and occupancies. Keep the source file for diagnosis.
Run is rejected immediatelySubmission validationInspect the field error, resource limits, authentication, and method compatibility.
Run remains QueuedWorker or dependencyCheck destination, private worker heartbeat, shared availability, and predecessors.
Worker starts but QE exitsRuntime or scientific inputRead the first solver error. Check pseudopotential files, species names, syntax, memory, and disk.
SCF cycles do not settleElectronic self-consistencyInspect geometry, occupations, magnetism, mixing, thresholds, and near-degenerate states.
Solver finished but result unavailableUpload or completionKeep the worker running; inspect network, credential validity, and final upload state.
Open in Figure Lab failsNumerical source retrievalRetry the source. Older runs may need their original numerical file when retained datasets are absent.
Overlay or pair warns about contextScientific comparisonRead geometry, energy-reference, and path identity. Use independent panels when comparability is not established.
Export failsRendering or font resourcesReconnect, reduce an oversized raster, and retry. Keep the figure document and source package.

Collect useful evidence

  1. Record the page and exact action, time, project, and run identifier.
  2. Copy the visible error and relevant solver-log lines around the first failure.
  3. Note the destination, allocation, operating system, worker image, and whether the problem repeats.
  4. For a plot issue, retain the numerical dataset, figure Source package, and expected axis convention.
  5. Contact support with the smallest reproducible example. Remove private credentials, cookies, passwords, and unrelated project data.

Protect recoverable work

Keep the current browser session open when it contains an unsynchronized figure or project. Export source files before clearing site storage.

A retry creates or repeats work according to the active action. Inspect existing queued and running calculations before submitting duplicates.

Replacing a personal credential invalidates the old worker. Finish or cancel active work before rotating it so a completed solver can still upload its result.

Related topics